CDS

Accession Number TCMCG017C26107
gbkey CDS
Protein Id OMO70428.1
Location complement(join(53748..54067,54660..54842,54993..55212,55410..55645,56227..56361,56806..56862,57573..57828))
GeneID InterPro:IPR001159
Organism Corchorus olitorius
locus_tag COLO4_28606

Protein

Length 468aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01019996.1
Definition Double-stranded RNA-binding protein [Corchorus olitorius]
Locus_tag COLO4_28606

EGGNOG-MAPPER Annotation

COG_category J
Description Double-stranded RNA-binding protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0002252        [VIEW IN EMBL-EBI]
GO:0002376        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003725        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006342        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0006955        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009615        [VIEW IN EMBL-EBI]
GO:0009616        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010267        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0014070        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016246        [VIEW IN EMBL-EBI]
GO:0016441        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0030422        [VIEW IN EMBL-EBI]
GO:0031047        [VIEW IN EMBL-EBI]
GO:0031048        [VIEW IN EMBL-EBI]
GO:0031050        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035194        [VIEW IN EMBL-EBI]
GO:0035195        [VIEW IN EMBL-EBI]
GO:0035196        [VIEW IN EMBL-EBI]
GO:0035821        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043331        [VIEW IN EMBL-EBI]
GO:0044003        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044403        [VIEW IN EMBL-EBI]
GO:0044419        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045087        [VIEW IN EMBL-EBI]
GO:0045814        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051607        [VIEW IN EMBL-EBI]
GO:0051701        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0051817        [VIEW IN EMBL-EBI]
GO:0052018        [VIEW IN EMBL-EBI]
GO:0052249        [VIEW IN EMBL-EBI]
GO:0060145        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0070918        [VIEW IN EMBL-EBI]
GO:0070919        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071359        [VIEW IN EMBL-EBI]
GO:0071407        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098542        [VIEW IN EMBL-EBI]
GO:0098586        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]
GO:1901699        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTACAAAACGAAATTGCAAGAGTTTTGCCAGAAGAAAGCATGGCAATTACCTGAGTACAACGTGAAAAAGGAAGGCGAAGATCACAATCCTCGTTTTCAAGCTACCGTCATCGTCAACGGCATTCCCTTTCAGTCTCAGAACCCTGCCAGGTCTTCCAAACAAGCCCAAAACGACGCCGCTCAGCTCGCTCTCCTTCATTTAGCTTCTCCTCCTGCTCCTCCTCCTCCTACTCTTCTACCTACAGCTTCTCCTGTTACCAAATTTGCACTACCCCTGAACTTTGTGGATTGGACTTCCAATCCAGTTCTTGGTTCTTCATATGCAATTGCTGATTCTGGGAGTAGTATTGCTAACAGGACATTGCACCCGGAAAGACAAGAAGCAAATCAGAATTCTCATGTCAATGAAACTGCCTACATTTGCAAGGATAATGCCAGATCTAATGATATTCGCCACTTGTACAAGACTCTACTCCAAAATTTTGCTCAAAAGAGAAACCTTATGTTACCGTCATATTCTTGTGAGTTTGAGGGTCCTCCTCATGCAACTCGCTTCAAGTGCAAGGTCACTATCAATGGACAAACATATGAGACTTTGGAGTTCTTTCCAACAATAAAGGAAGCTGAACATGCAGCTGCAAAAATAGCTTTATCAGCATTGTCACCGGGTTCTTTTCAAGAGGAAGACATTAGCTTCTACAAGAACCTTTTGCAAGAACTAATTCAAAAAGAAGGCTGTCCTCTACCGGTTTACACAACAACTAGATCTGGTGAAGCCCATAATCCAACATTTGTTTCGGTTGTGGAGGTAAAAGGAGAGGTTTTCAGAGGTCAGGAAGCAAAAACCAAGAAGTTGGCAGAGGTTTTGGCAGCAAAAGTTGCTTACATGAAGTTAAACGACTGCAAGTCTAATAGGGGATTGACGGTTATGACTCCTGCCTACCAAGAGCGAAAAGTGCCTGTGCTCTCATCTCCTCACTCGCCATCAAATGTTAATGCTGATAACCAACAGAATGTCAGTCCTAAAGCTGGCACAATATTAAATCCTAGCTCATCTTCAGGCAAGGACCAGCATGAGGATATAGATGGACCATTTAGCGATTTCCCGCAACCAGAGATGACTACAGATTGGCCAAGCAGTTCAACCTCATCTAATCTATCCGATCCTCCTGCACCAGAAGATAACCTTTCTACACTTAATTTGCCATCTAATCACTCAGCTACTTCCAACTTGGATTCAGATTCAGTCACCAAGCGGCCTCTTCCAATGAGTAACTTATCGTGCAACAGGGTTGTTGTTCGTCCACGTGTGGAAAACATGGAAATTCCTGCTGGTAGCACTGTGGATCCCAGGAGTGATGATACTTGGTTTGCTGTAAAATTTGAATCTCAACCAGACCGGTGA
Protein:  
MYKTKLQEFCQKKAWQLPEYNVKKEGEDHNPRFQATVIVNGIPFQSQNPARSSKQAQNDAAQLALLHLASPPAPPPPTLLPTASPVTKFALPLNFVDWTSNPVLGSSYAIADSGSSIANRTLHPERQEANQNSHVNETAYICKDNARSNDIRHLYKTLLQNFAQKRNLMLPSYSCEFEGPPHATRFKCKVTINGQTYETLEFFPTIKEAEHAAAKIALSALSPGSFQEEDISFYKNLLQELIQKEGCPLPVYTTTRSGEAHNPTFVSVVEVKGEVFRGQEAKTKKLAEVLAAKVAYMKLNDCKSNRGLTVMTPAYQERKVPVLSSPHSPSNVNADNQQNVSPKAGTILNPSSSSGKDQHEDIDGPFSDFPQPEMTTDWPSSSTSSNLSDPPAPEDNLSTLNLPSNHSATSNLDSDSVTKRPLPMSNLSCNRVVVRPRVENMEIPAGSTVDPRSDDTWFAVKFESQPDR